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隐性纤毛病的生物模块存在次生遗传负担和非随机分布
2020-10-13 16:57

美国杜克大学医学中心Nicholas Katsanis研究组揭示隐性纤毛病中生物模块的次生遗传负担和非随机分布。这一研究成果于2020年10月12日在线发表在国际学术期刊《自然—遗传学》上。

研究人员对两个独立队列的Bardet-Biedl综合征(BBS)患者进行了系统的次级变量负担分析,这些患者在每个个体的17个BBS基因之一中都有已知的隐性双等位基因致病突变。研究人员观察到与人群控制或同一人群中非BBS诊断且隐性变异在同一基因组中的人群相比,BBS患者中的反式罕见非同义次级变体大量富集。
 
令人惊讶的是,研究人员在伴侣蛋白编码基因中发现了次要等位基因的大量过量表达,这一发现得到了体内涉及这种复合物的上位性相互作用的证实。这些数据表明BBS具有复杂的遗传结构,可提供疾病模块的生物学特性,并为隐性疾病中的次级变量负担分析提供了模型。
 
据悉,遗传背景对驱动突变的影响已得到充分证实;然而,背景与孟德尔基因座相互作用的机制仍不清楚。
 
附:英文原文

Title: Evidence for secondary-variant genetic burden and non-random distribution across biological modules in a recessive ciliopathy

Author: Maria Kousi, Onuralp Sylemez, Aysegl Ozanturk, Niki Mourtzi, Sebastian Akle, Irwin Jungreis, Jean Muller, Christopher A. Cassa, Harrison Brand, Jill Anne Mokry, Maxim Y. Wolf, Azita Sadeghpour, Kelsey McFadden, Richard A. Lewis, Michael E. Talkowski, Hlne Dollfus, Manolis Kellis, Erica E. Davis, Shamil R. Sunyaev, Nicholas Katsanis

Issue&Volume: 2020-10-12

Abstract: The influence of genetic background on driver mutations is well established; however, the mechanisms by which the background interacts with Mendelian loci remain unclear. We performed a systematic secondary-variant burden analysis of two independent cohorts of patients with Bardet–Biedl syndrome (BBS) with known recessive biallelic pathogenic mutations in one of 17 BBS genes for each individual. We observed a significant enrichment of trans-acting rare nonsynonymous secondary variants in patients with BBS compared with either population controls or a cohort of individuals with a non-BBS diagnosis and recessive variants in the same gene set. Strikingly, we found a significant over-representation of secondary alleles in chaperonin-encoding genes—a finding corroborated by the observation of epistatic interactions involving this complex in vivo. These data indicate a complex genetic architecture for BBS that informs the biological properties of disease modules and presents a model for secondary-variant burden analysis in recessive disorders.

DOI: 10.1038/s41588-020-0707-1

Source: https://www.nature.com/articles/s41588-020-0707-1

Nature Genetics:《自然—遗传学》,创刊于1992年。隶属于施普林格·自然出版集团,最新IF:41.307
官方网址:https://www.nature.com/ng/
投稿链接:https://mts-ng.nature.com/cgi-bin/main.plex


本期文章:《自然—遗传学》:Online/在线发表

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