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SPOCD1是piRNA指导DNA从头甲基化的重要执行者
2020-07-18 08:07

英国爱丁堡大学Dónal O’Carroll研究团队发现,SPOCD1是piRNA指导DNA从头甲基化的重要执行者。这一研究成果于2020年7月16日在线发表在国际学术期刊《自然》上。

研究人员表示,在哺乳动物中,从体细胞中获取生殖系细胞具有一项重要的挑战,即消除和重置基因组甲基化。在雄性生殖系中,RNA指导DNA甲基化使年轻活跃的转座因子(TE)沉默。PIWI蛋白MIWI2(PIWIL4)及其相关的PIWI相互作用RNA(piRNA)指导TE DNA甲基化。有研究提出piRNA可束缚MIWI2到新生的TE转录本。但是,人们对MIWI2指导从头进行TE甲基化的机制了解甚少,但对于生殖系的永生性至关重要。
 
研究人员定义了从头进行基因组甲基化的胎儿生殖细胞MIWI2相互作用组,并鉴定了一个新的MIWI2相关因子SPOCD1,这对于年轻TE甲基化和沉默至关重要。小鼠中Spocd1的缺失导致雄性不育,但既不影响piRNA生成,也不影响MIWI2在细胞核中的定位。SPOCD1是一种核蛋白,其表达仅限于从头基因组甲基化的时期。
 
研究人员发现SPOCD1与DNMT3L和DNMT3A(即头甲基化机器的组成部分以及NURD和BAF染色质重塑复合物的成分)能够从体内共纯化出来。研究人员提出了一个模型:MIWI2被束缚到新生的TE转录本上,通过SPOCD1募集了抑制性染色质重塑活性以及从头甲基化机器。总而言之,研究人员确定了哺乳动物piRNA指导DNA甲基化的一种新颖且必不可少的执行者。
 
附:英文原文

Title: SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation

Author: Ansgar Zoch, Tania Auchynnikava, Rebecca V. Berrens, Yuka Kabayama, Theresa Schpp, Madeleine Heep, Lina Vasiliauskait, Yuvia A. Prez-Rico, Atlanta G. Cook, Alena Shkumatava, Juri Rappsilber, Robin C. Allshire, Dnal OCarroll

Issue&Volume: 2020-07-16

Abstract: In mammals, the acquisition of the germline from the soma provides the germline with an essential challenge, the necessity to erase and reset genomic methylation1. In the male germline, RNA-directed DNA methylation silences young active transposable elements (TEs)2–4. The PIWI protein MIWI2 (PIWIL4) and its associated PIWI-interacting RNAs (piRNAs) instruct TE DNA methylation3,5. piRNAs are proposed to tether MIWI2 to nascent TE transcripts; however, the mechanism by which MIWI2 directs de novo TE methylation is poorly understood but central to the immortality of the germline. Here we define the interactome of MIWI2 in foetal gonocytes that are undergoing de novo genome methylation and identify a novel MIWI2-associated factor, SPOCD1, that is essential for young TE methylation and silencing. The loss of Spocd1 in mice results in male-specific infertility but impacts neither piRNA biogenesis nor localization of MIWI2 to the nucleus. SPOCD1 is a nuclear protein and its expression is restricted to the period of de novo genome methylation. We found SPOCD1 co-purified in vivo with DNMT3L and DNMT3A, components of the de novo methylation machinery as well as constituents of the NURD and BAF chromatin remodelling complexes. We propose a model whereby tethering of MIWI2 to a nascent TE transcript recruits repressive chromatin remodelling activities and the de novo methylation apparatus through SPOCD1. In summary, we have identified a novel and essential executor of mammalian piRNA-directed DNA methylation.

DOI: 10.1038/s41586-020-2557-5

Source: https://www.nature.com/articles/s41586-020-2557-5

Nature:《自然》,创刊于1869年。隶属于施普林格·自然出版集团,最新IF:69.504
官方网址:http://www.nature.com/
投稿链接:http://www.nature.com/authors/submit_manuscript.html


本期文章:《自然》:Online/在线发表

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