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科学家开发出超平坦石墨烯上的均匀薄冰用于高分辨的冷冻电镜成像
2022-12-18 17:05

北京大学彭海琳等研究人员合作开发出超平坦石墨烯上的均匀薄冰用于高分辨的冷冻电镜成像。该研究于2022年12月15日在线发表于国际一流学术期刊《自然—方法学》。

研究人员表示,冷冻电镜(cryo-EM)可以观察到大分子的原子结构,这些大分子在接近原生状态下被嵌入到玻璃化的薄冰中。然而,作为确保高图像质量的关键因素,薄冰厚度的均匀性在试样制备过程中很难控制,这已成为高分辨率cryo-EM的主要挑战之一。
 
研究人员发现,薄冰的均匀性依赖于支撑膜的表面平整度,并开发了一种使用超扁平石墨烯(UFG)作为cryo-EM标本制备支撑物的方法,以实现对玻璃质冰厚度的更好控制。结果表明,UFG上均匀的薄冰改善了玻璃体标本的图像质量。使用这样的方法,研究人员成功地确定了血红蛋白(64 kDa)、无对称性的α-胎儿蛋白(67 kDa)和链霉素(52 kDa)的三维结构,分辨率分别为3.5埃、2.6埃和2.2埃。此外,这些结果证明了UFG在低温电子断层扫描和基于结构的药物发现领域的潜力。
 
附:英文原文

Title: Uniform thin ice on ultraflat graphene for high-resolution cryo-EM

Author: Zheng, Liming, Liu, Nan, Gao, Xiaoyin, Zhu, Wenqing, Liu, Kun, Wu, Cang, Yan, Rui, Zhang, Jincan, Gao, Xin, Yao, Yating, Deng, Bing, Xu, Jie, Lu, Ye, Liu, Zhongmin, Li, Mengsen, Wei, Xiaoding, Wang, Hong-Wei, Peng, Hailin

Issue&Volume: 2022-12-15

Abstract: Cryo-electron microscopy (cryo-EM) visualizes the atomic structure of macromolecules that are embedded in vitrified thin ice at their close-to-native state. However, the homogeneity of ice thickness, a key factor to ensure high image quality, is poorly controlled during specimen preparation and has become one of the main challenges for high-resolution cryo-EM. Here we found that the uniformity of thin ice relies on the surface flatness of the supporting film, and developed a method to use ultraflat graphene (UFG) as the support for cryo-EM specimen preparation to achieve better control of vitreous ice thickness. We show that the uniform thin ice on UFG improves the image quality of vitrified specimens. Using such a method we successfully determined the three-dimensional structures of hemoglobin (64kDa), α-fetoprotein (67kDa) with no symmetry, and streptavidin (52kDa) at a resolution of 3.5, 2.6 and 2.2, respectively. Furthermore, our results demonstrate the potential of UFG for the fields of cryo-electron tomography and structure-based drug discovery.

DOI: 10.1038/s41592-022-01693-y

Source: https://www.nature.com/articles/s41592-022-01693-y

 

Nature Methods:《自然—方法学》,创刊于2004年。隶属于施普林格·自然出版集团,最新IF:47.99
官方网址:https://www.nature.com/nmeth/
投稿链接:https://mts-nmeth.nature.com/cgi-bin/main.plex


本期文章:《自然—方法学》:Online/在线发表

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