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rice fine mapping 2002-2011

已有 5650 次阅读 2013-9-27 00:06 |个人分类:QTL精细定位|系统分类:科研笔记


1: Li J, Zhang W, Wu H, Guo T, Liu X, Wan X, Jin J, Hanh TT, Thoa NT, Chen M, Liu
S, Chen L, Liu X, Wang J, Zhai H, Wan J. Fine mapping of stable QTLs related to
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2: Bian XF, Liu X, Zhao ZG, Jiang L, Gao H, Zhang YH, Zheng M, Chen LM, Liu SJ,
Zhai HQ, Wan JM. Heading date gene, dth3 controlled late flowering in O.
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3: Wang P, Zhou G, Yu H, Yu S. Fine mapping a major QTL for flag leaf size and
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4: Zhang B, Tian F, Tan L, Xie D, Sun C. Characterization of a novel
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5: Cheng ZJ, Mao BG, Gao SW, Zhang L, Wang JL, Lei CL, Zhang X, Wu FQ, Guo XP,
Wan J. Fine mapping of qPAA8, a gene controlling panicle apical development in
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6: Salunkhe AS, Poornima R, Prince KS, Kanagaraj P, Sheeba JA, Amudha K, Suji KK,
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7: Ding X, Li X, Xiong L. Evaluation of near-isogenic lines for drought
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8: Kovi MR, Zhang Y, Yu S, Yang G, Yan W, Xing Y. Candidacy of a chitin-inducible
gibberellin-responsive gene for a major locus affecting plant height in rice that
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9: Huang QN, Shi YF, Yang Y, Feng BH, Wei YL, Chen J, Baraoidan M, Leung H, Wu
JL. Characterization and genetic analysis of a light- and temperature-sensitive
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10: Zhou YF, Zhang XY, Xue QZ. Fine mapping and candidate gene prediction of the
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11: Uga Y, Okuno K, Yano M. Dro1, a major QTL involved in deep rooting of rice
under upland field conditions. J Exp Bot. 2011 May;62(8):2485-94. doi:
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12: Huang H, Huang L, Feng G, Wang S, Wang Y, Liu J, Jiang N, Yan W, Xu L, Sun P,
Li Z, Pan S, Liu X, Xiao Y, Liu E, Dai L, Wang GL. Molecular mapping of the new
blast resistance genes Pi47 and Pi48 in the durably resistant local rice cultivar
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13: Gao D, He B, Zhou Y, Sun L. Genetic and molecular analysis of a purple sheath
somaclonal mutant in japonica rice. Plant Cell Rep. 2011 May;30(5):901-11. doi:
10.1007/s00299-011-1004-3. Epub 2011 Jan 20. PubMed PMID: 21249365.


14: Zhang YX, Wang Q, Jiang L, Liu LL, Wang BX, Shen YY, Cheng XN, Wan JM. Fine
mapping of qSTV11(KAS), a major QTL for rice stripe disease resistance. Theor
Appl Genet. 2011 May;122(8):1591-604. doi: 10.1007/s00122-011-1557-0. Epub 2011
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15: Qiao Y, Piao R, Shi J, Lee SI, Jiang W, Kim BK, Lee J, Han L, Ma W, Koh HJ.
Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3,
which confers high grain yield in rice (Oryza sativa L.). Theor Appl Genet. 2011
May;122(7):1439-49. doi: 10.1007/s00122-011-1543-6. Epub 2011 Feb 12. PubMed
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16: Chen S, Liu X, Zeng L, Ouyang D, Yang J, Zhu X. Genetic analysis and
molecular mapping of a novel recessive gene xa34(t) for resistance against
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17: Zeng X, Yang X, Zhao Z, Lin F, Wang L, Pan Q. Characterization and fine
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18: Wu X, Zuo S, Chen Z, Zhang Y, Zhu J, Ma N, Tang J, Chu C, Pan X. Fine mapping
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19: Babu R, Jiang CJ, Xu X, Kottapalli KR, Takatsuji H, Miyao A, Hirochika H,
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genotype, spl(NF4050-8) that confers blast resistance in rice. Theor Appl Genet.
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20: Xu J, Wang B, Wu Y, Du P, Wang J, Wang M, Yi C, Gu M, Liang G. Fine mapping
and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic
male sterile gene in rice (Oryza sativa L.). Theor Appl Genet. 2011
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21: Mao D, Yu H, Liu T, Yang G, Xing Y. Two complementary recessive genes in
duplicated segments control etiolation in rice. Theor Appl Genet. 2011
Feb;122(2):373-83. doi: 10.1007/s00122-010-1453-z. Epub 2010 Sep 26. PubMed PMID:
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22: Zhou L, Zeng Y, Zheng W, Tang B, Yang S, Zhang H, Li J, Li Z. Fine mapping a
QTL qCTB7 for cold tolerance at the booting stage on rice chromosome 7 using a
near-isogenic line. Theor Appl Genet. 2010 Sep;121(5):895-905. doi:
10.1007/s00122-010-1358-x. Epub 2010 May 30. PubMed PMID: 20512559.


23: Obara M, Tamura W, Ebitani T, Yano M, Sato T, Yamaya T. Fine-mapping of
qRL6.1, a major QTL for root length of rice seedlings grown under a wide range of
NH4(+) concentrations in hydroponic conditions. Theor Appl Genet. 2010
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24: Koseki M, Kitazawa N, Yonebayashi S, Maehara Y, Wang ZX, Minobe Y.
Identification and fine mapping of a major quantitative trait locus originating
from wild rice, controlling cold tolerance at the seedling stage. Mol Genet
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25: Li W, Wu J, Weng S, Zhang D, Zhang Y, Shi C. Characterization and fine
mapping of the glabrous leaf and hull mutants (gl1) in rice (Oryza sativa L.).
Plant Cell Rep. 2010 Jun;29(6):617-27. doi: 10.1007/s00299-010-0848-2. Epub 2010
Apr 8. PubMed PMID: 20376671.


26: Fujita D, Ebron LA, Araki E, Kato H, Khush GS, Sheehy JE, Lafarge T, Fukuta
Y, Kobayashi N. Fine mapping of a gene for low-tiller number, Ltn, in japonica
rice (Oryza sativa L.) variety Aikawa 1. Theor Appl Genet. 2010
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27: Peng HF, Chen XH, Lu YP, Peng YF, Wan BH, Chen ND, Wu B, Xin SP, Zhang GQ.
Fine mapping of a gene for non-pollen type thermosensitive genic male sterility
in rice (Oryza sativa L.). Theor Appl Genet. 2010 Mar;120(5):1013-20. doi:
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28: Qiao Y, Lee SI, Piao R, Jiang W, Ham TH, Chin JH, Piao Z, Han L, Kang SY, Koh
HJ. Fine mapping and candidate gene analysis of the floury endosperm gene,
FLO(a), in rice. Mol Cells. 2010 Feb 28;29(2):167-74. doi:
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29: Wang Y, Zhong ZZ, Zhao ZG, Jiang L, Bian XF, Zhang WW, Liu LL, Ikehashi H,
Wan JM. Fine mapping of a gene causing hybrid pollen sterility between Yunnan
weedy rice and cultivated rice (Oryza sativa L.) and phylogenetic analysis of
Yunnan weedy rice. Planta. 2010 Feb;231(3):559-70. doi:
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30: Yan W, Ye S, Jin Q, Zeng L, Peng Y, Yan D, Yang W, Yang D, He Z, Dong Y,
Zhang X. Characterization and mapping of a novel mutant sms1 (senescence and male
sterility 1) in rice. J Genet Genomics. 2010 Jan;37(1):47-55. doi:
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31: Shan JX, Zhu MZ, Shi M, Gao JP, Lin HX. Fine mapping and candidate gene
analysis of spd6, responsible for small panicle and dwarfness in wild rice (Oryza
rufipogon Griff.). Theor Appl Genet. 2009 Sep;119(5):827-36. doi:
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32: Wang L, Xu X, Lin F, Pan Q. Characterization of rice blast resistance genes
in the Pik cluster and fine mapping of the Pik-p locus. Phytopathology. 2009
Aug;99(8):900-5. doi: 10.1094/PHYTO-99-8-0900. PubMed PMID: 19594308.


33: Liu T, Mao D, Zhang S, Xu C, Xing Y. Fine mapping SPP1, a QTL controlling the
number of spikelets per panicle, to a BAC clone in rice (Oryza sativa). Theor
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34: Wang WY, Ding HF, Li GX, Jiang MS, Li RF, Liu X, Zhang Y, Yao FY.
Delimitation of the PSH1(t) gene for rice purple leaf sheath to a 23.5 kb DNA
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35: Zhou L, Chen L, Jiang L, Zhang W, Liu L, Liu X, Zhao Z, Liu S, Zhang L, Wang
J, Wan J. Fine mapping of the grain chalkiness QTL qPGWC-7 in rice (Oryza sativa
L.). Theor Appl Genet. 2009 Feb;118(3):581-90. doi: 10.1007/s00122-008-0922-0.
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36: Guo L, Ma L, Jiang H, Zeng D, Hu J, Wu L, Gao Z, Zhang G, Qian Q. Genetic
analysis and fine mapping of two genes for grain shape and weight in rice. J
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37: Jiang L, Guo L, Jiang H, Zeng D, Hu J, Wu L, Liu J, Gao Z, Qian Q. Genetic
analysis and fine-mapping of a dwarfing with withered leaf-tip mutant in rice. J
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38: Wu X, Li X, Xu C, Wang S. Fine genetic mapping of xa24, a recessive gene for
resistance against Xanthomonas oryzae pv. oryzae in rice. Theor Appl Genet. 2008
Dec;118(1):185-91. doi: 10.1007/s00122-008-0888-y. Epub 2008 Sep 16. PubMed PMID:
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39: Xu X, Chen H, Fujimura T, Kawasaki S. Fine mapping of a strong QTL of field
resistance against rice blast, Pikahei-1(t), from upland rice Kahei, utilizing a
novel resistance evaluation system in the greenhouse. Theor Appl Genet. 2008
Oct;117(6):997-1008. doi: 10.1007/s00122-008-0839-7. Epub 2008 Aug 29. PubMed
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40: Shimizu A, Kato K, Komatsu A, Motomura K, Ikehashi H. Genetic analysis of
root elongation induced by phosphorus deficiency in rice (Oryza sativa L.): fine
QTL mapping and multivariate analysis of related traits. Theor Appl Genet. 2008
Oct;117(6):987-96. doi: 10.1007/s00122-008-0838-8. Epub 2008 Jul 19. PubMed PMID:
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41: Luo JJ, Hao W, Jin J, Gao JP, Lin HX. Fine mapping of Spr3, a locus for
spreading panicle from African cultivated rice (Oryza glaberrima Steud.). Mol
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42: Cha YS, Ji H, Yun DW, Ahn BO, Lee MC, Suh SC, Lee CS, Ahn EK, Jeon YH, Jin
ID, Sohn JK, Koh HJ, Eun MY. Fine mapping of the rice Bph1 gene, which confers
resistance to the brown planthopper (Nilaparvata lugens stal), and development of
STS markers for marker-assisted selection. Mol Cells. 2008 Aug 31;26(2):146-51.
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43: Wan X, Weng J, Zhai H, Wang J, Lei C, Liu X, Guo T, Jiang L, Su N, Wan J.
Quantitative trait loci (QTL) analysis for rice grain width and fine mapping of
an identified QTL allele gw-5 in a recombination hotspot region on chromosome 5.
Genetics. 2008 Aug;179(4):2239-52. doi: 10.1534/genetics.108.089862. Epub 2008
Aug 9. PubMed PMID: 18689882; PubMed Central PMCID: PMC2516094.


44: Jiang W, Chu SH, Piao R, Chin JH, Jin YM, Lee J, Qiao Y, Han L, Piao Z, Koh
HJ. Fine mapping and candidate gene analysis of hwh1 and hwh2, a set of
complementary genes controlling hybrid breakdown in rice. Theor Appl Genet. 2008
May;116(8):1117-27. doi: 10.1007/s00122-008-0740-4. PubMed PMID: 18335199.


45: Li W, Zeng R, Zhang Z, Ding X, Zhang G. Identification and fine mapping of
S-d, a new locus conferring the partial pollen sterility of intersubspecific F1
hybrids in rice (Oryza sativa L.). Theor Appl Genet. 2008 May;116(7):915-22. doi:
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46: Xing YZ, Tang WJ, Xue WY, Xu CG, Zhang Q. Fine mapping of a major
quantitative trait loci, qSSP7, controlling the number of spikelets per panicle
as a single Mendelian factor in rice. Theor Appl Genet. 2008 Apr;116(6):789-96.
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47: Xie X, Jin F, Song MH, Suh JP, Hwang HG, Kim YG, McCouch SR, Ahn SN. Fine
mapping of a yield-enhancing QTL cluster associated with transgressive variation
in an Oryza sativa x O. rufipogon cross. Theor Appl Genet. 2008
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48: Gu K, Sangha JS, Li Y, Yin Z. High-resolution genetic mapping of bacterial
blight resistance gene Xa10. Theor Appl Genet. 2008 Jan;116(2):155-63. Epub 2007
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49: Xue Y, Jiang L, Su N, Wang JK, Deng P, Ma JF, Zhai HQ, Wan JM. The genetic
basic and fine-mapping of a stable quantitative-trait loci for aluminium
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50: Boisnard A, Albar L, Thiéméle D, Rondeau M, Ghesquière A. Evaluation of genes
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51: Yan C, Yan S, Zeng X, Zhang Z, Gu M. Fine mapping and isolation of Bc7(t),
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52: Liu X, Yang Q, Lin F, Hua L, Wang C, Wang L, Pan Q. Identification and fine
mapping of Pi39(t), a major gene conferring the broad-spectrum resistance to
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53: Zhao ZG, Jiang L, Zhang WW, Yu CY, Zhu SS, Xie K, Tian H, Liu LL, Ikehashi H,
Wan JM. Fine mapping of S31, a gene responsible for hybrid embryo-sac abortion in
rice (Oryza sativa L.). Planta. 2007 Oct;226(5):1087-96. Epub 2007 Jun 5. PubMed
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54: Luo Z, Yang Z, Zhong B, Li Y, Xie R, Zhao F, Ling Y, He G. Genetic analysis
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55: Liu W, Fu Y, Hu G, Si H, Zhu L, Wu C, Sun Z. Identification and fine mapping
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56: Li W, Jiang L, Zhou S, Wang C, Liu L, Chen L, Ikehashi H, Wan J. Fine mapping
of pss1, a pollen semi-sterile gene in rice (Oryza sativa L.). Theor Appl Genet.
2007 Mar;114(5):939-46. Epub 2007 Feb 6. PubMed PMID: 17279367.


57: Li D, Chen L, Jiang L, Zhu S, Zhao Z, Liu S, Su N, Zhai H, Ikehashi H, Wan J.
Fine mapping of S32(t), a new gene causing hybrid embryo sac sterility in a
Chinese landrace rice (Oryza sativa L.). Theor Appl Genet. 2007
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58: Wang J, Wan X, Crossa J, Crouch J, Weng J, Zhai H, Wan J. QTL mapping of
grain length in rice (Oryza sativa L.) using chromosome segment substitution
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59: Xie X, Song MH, Jin F, Ahn SN, Suh JP, Hwang HG, McCouch SR. Fine mapping of
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60: Luo H, Li Y, Yang Z, Zhong B, Xie R, Ren M, Luo D, He G. Fine mapping of a
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61: Deng Y, Zhu X, Shen Y, He Z. Genetic characterization and fine mapping of the
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resistant Chinese variety. Theor Appl Genet. 2006 Aug;113(4):705-13. Epub 2006
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62: Tian F, Zhu Z, Zhang B, Tan L, Fu Y, Wang X, Sun CQ. Fine mapping of a
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63: Andaya VC, Tai TH. Fine mapping of the qCTS12 locus, a major QTL for seedling
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64: Gui M, Zeng YW, Du J, Pu XY, Shen SQ, Yang SM, Zhang H. [Evaluation of
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65: Wan XY, Wan JM, Jiang L, Wang JK, Zhai HQ, Weng JF, Wang HL, Lei CL, Wang JL,
Zhang X, Cheng ZJ, Guo XP. QTL analysis for rice grain length and fine mapping of
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66: Chen JW, Wang L, Pang XF, Pan QH. Genetic analysis and fine mapping of a rice
brown planthopper (Nilaparvata lugens Stål) resistance gene bph19(t). Mol Genet
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67: Chu Z, Fu B, Yang H, Xu C, Li Z, Sanchez A, Park YJ, Bennetzen JL, Zhang Q,
Wang S. Targeting xa13, a recessive gene for bacterial blight resistance in rice.
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68: Ma H, Zhang S, Ji L, Zhu H, Yang S, Fang X, Yang R. Fine mapping and in
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69: Wang GW, He YQ, Xu CG, Zhang Q. Fine mapping of f5-Du, a gene conferring
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70: Liu XQ, Wang L, Chen S, Lin F, Pan QH. Genetic and physical mapping of
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71: Zou J, Chen Z, Zhang S, Zhang W, Jiang G, Zhao X, Zhai W, Pan X, Zhu L.
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72: Lee DS, Chen LJ, Suh HS. Genetic characterization and fine mapping of a novel
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73: Ji Q, Lu J, Chao Q, Gu M, Xu M. Delimiting a rice wide-compatibility gene S5n
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74: Wang RX, Li PJ, Chen HQ, Wen SK, Li JY, Zhu XD. [Fine localization of rice
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75: Wang YH, Liu SJ, Ji SL, Zhang WW, Wang CM, Jiang L, Wan JM. Fine mapping and
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76: Andaya CB, Tai TH. Fine mapping of the rice low phytic acid (Lpa1) locus.
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77: Luo Q, Zhou K, Zhao X, Zeng Q, Xia H, Zhai W, Xu J, Wu X, Yang H, Zhu L.
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78: Li J, Thomson M, McCouch SR. Fine mapping of a grain-weight quantitative
trait locus in the pericentromeric region of rice chromosome 3. Genetics. 2004
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79: Xu YH, Zhu YY, Zhou HC, Li Q, Sun ZX, Liu YG, Lin HX, He ZH. Identification
of a 98-kb DNA segment containing the rice Eui gene controlling uppermost
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