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An artistic work in presentation
热度 2 袁曙光 2012-5-24 22:36
An artistic work in presentation
Figure Legend: An agonist molecule binds in family A GPCR
2635 次阅读|4 个评论 热度 2
crazy speaker
袁曙光 2012-5-23 14:43
crazy speaker
2904 次阅读|没有评论
useful hot key for Qtiplot
袁曙光 2012-4-27 01:42
http://soft.proindependent.com The Graph Menu This menu is only active (visible) when a graph window is selected. Graph - Add/Remove Curves... ( Alt-C ) Opens the Add/Remove Curves... dialog , allowing easy addition or removal of curves from the active pl ...
个人分类: 好文转载|4638 次阅读|没有评论
compile gromacs GPU version from source code
热度 1 袁曙光 2012-4-24 14:37
1. download source code: git clone git://git.gromacs.org/gromacs.git 2. install openMM and CUDA library into /soft/gromacs-gpu/openmm (download from https://simtk.org/project/xml/downloads.xml?group_id=506 ) /soft/gromacs-gpu/cuda configuring .cshrc as following etenv OPENMM_ROOT_DIR /soft/o ...
5622 次阅读|2 个评论 热度 1
compile Desmond from source code
袁曙光 2012-4-15 22:02
As a highly optimized parallel MD tool, compiled Desmond is around 20-30% faster than the pre-compiled version which is distrubuted in Schrodinger software. here are some steps for how to compile Desmond from source code. 1. download source code from http://www.deshawresearch.com/resources_desmond. ...
个人分类: 科研笔记|5383 次阅读|没有评论
20 years of SUSE Linux
袁曙光 2012-4-13 13:56
20 years of SUSE Linux
个人分类: Linux相关|3602 次阅读|没有评论
constrain optimization in Gaussion
袁曙光 2012-3-13 02:05
It would be necessary to restrain bond length or dihedral angle when optimizing geometry of ligand to avoid intra-molecular hydrogen bonds and transition state type structures. here is some description of restrain in Gaussian. from http://www.gaussian.com/g_tech/g_ur/k_opt.htm Opt DESCRIPT ...
12464 次阅读|没有评论
Progress of present GPCR structure
袁曙光 2012-3-12 15:15
Progress of present GPCR structure
from stevens.scripps.edu
个人分类: 科研笔记|3529 次阅读|没有评论
Merry Christmas and Happy New Year
袁曙光 2011-12-21 13:13
Merry Christmas and Happy New Year
个人分类: 未分类|2812 次阅读|没有评论
The art of mMAYA
袁曙光 2011-11-18 15:41
The art of mMAYA
个人分类: 科研笔记|4739 次阅读|没有评论

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