|
从对接的化合物中挑选最终购买的化合物。
MATCHES框中一次只能添加一个entry
通过add 实现OR的功能,
通过substract实现AND NOT的功能,
通过Intersect 实现IAND 的功能。
Why an Entry Selection Language?
The Entry Selection Language (ESL) is used for selecting entries in a Maestro project based on the properties of those entries. ESL expressions can be of arbitrary complexity and involve the use of parentheses and logical operators.
Entry selection can be done with commands in the Command Input Area of the main window. The three selection commands are:
entryselectonly ESL-expressionentryselect ESL-expressionentryunselect ESL-expressionEntry Properties
There are a number of properties that can be used in ESL expressions:
Entry ID
The entry ID is the unique identifier for the entry, and is an integer assigned by Maestro. The syntax is
{id|entry|entry_id} nameEntry Name
The name of the entry is not unique. The syntax for matching by name is
{name|entry_name} name{name_re|entry_re|entry_name_re} name_expression
For the _re expressions, wildcard characters can be used: "*" matches any number of characters, "?" matches any single character, "#" matches any single digit. For the entry expression only the literal name matches.
Entry Selection State
This allows the selection of entries based on whether or not they are already selected. The syntax is:
selectedEntry Workspace Inclusion State
This allows the selection of entries based on whether or not they are already included for display in the Workspace. The syntax is:
includedAll Entries
This is a quick way to select all entries. The syntax is:
all
Property names can be all upper case or all lower case, but not mixed case.
The following logical operators are supported (in order of decreasing priority)
notand or
At equal levels of priority expressions are evaluated from left to right. Parentheses can be used to override the default order of priority.
ESL expressions may also contain comparisons involving entry properties. Properties may be defined by their data names or their user names. The data names are the names that appear in Maestro files. The user names are the names that appear in the heading row of the Project Table. User names are specified as
user(propertyname)
For example, the "volume" property is specified as
user(volume)
The following names
user(#stars)i_qp_#stars
are equivalent names for properties.
For properties of type integer and real the following comparison operators are supported:
==!=<><=>=
For boolean properties the name of the property can be specified and will match any entries where that property is true. It is also possible to use:
==!=
in explicit comparisons with the values true and false.
Comparisons involving string properties have the form:
property_namestring_literal
for a match of the property name with the string literal. For example:
s_m_string_prop leftuser(string prop) left*
String literals may include the "*", "?" and "#" wildcard characters available for entry names as described above.
Some examples of ESL expressions are:
entry anentryentry_re ligand*entry_re ligprep and selected(entry_re lig# and selected ) and not includeduser(volume) < 100.0 and selectedincluded and user(#stars) == 2 and user(#amine) == 0user(log s) > 0.5 and user(log S) < 1.0
A few examples of the use of ESL to select entries are provided here.
To select only converged, low energy structures:
entryselectonly user(Minimization Converged-OPLS2005) anduser(Relative Potential Energy-OPLS2005) <= 5
To select only those compounds with QikProp properties that obey the "rule of five":
entryselectonly user(donorHB) < 5 anduser(mol MW) < 500 anduser(QPlogPo/w) < 5 anduser(hb accptHB) < 10
Archiver|手机版|科学网 ( 京ICP备07017567号-12 )
GMT+8, 2024-6-15 22:33
Powered by ScienceNet.cn
Copyright © 2007- 中国科学报社