推荐一个在线的分析组织特异性的服务器Pattern Gene Finder

厦门大学开发的，基于基因的表达数据，如RNA－seq, array等，发现相似表达模式的基因等

Pattern Gene Finder (PaGeFinder) is a free on-line server to provide interactive pattern analysis of user-submitted gene expression profiles generated by high throughput technologies, e.g. microarray, RNA-seq, SAGE. PaGeFinder implements new algorithms and functions for quantitative identification of pattern genes like specific/selective genes, housekeeping genes and repressed genes. PaGeFinder is particularly useful for dynamic analysis of serial transcriptomic data under different spatiotemporal conditions (tissues, developmental stages, physiological states, etc). It would be also useful in comparing gene expression profiles from the same platform or even different platforms.

Citation: : Pan, J.B., Hu, S.C., Wang, H., Zou, Q. and Ji, Z.L. (2012) PaGeFinder: quantitative identification of spatiotemporal pattern genes. Bioinformatics, 28, 1544-1545. [html]